PIT Bioinformatics Group
Department of Computer Science, Eötvös University
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    • AmphoraNetThe webserver implementation of the AMPHORA2 workflow for phylogenetic analysis of metagenomic shotgun sequencing data
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Interview on Hungarian TV channel M1.

By root | July 5, 2015
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Our webserver Budapest Reference Connectome displays a 3D interactive consensus brain graph. The media showed significant interest towards this webserver, including an interview with PIT group researchers Vince Grolmusz and Balázs Szalkai on Hungarian state TV channel M1 on April 17, 2015:

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← Paper on Budapest Reference Connectome is published New publication from our group →

Budapest Reference Connectome

View a parameterizable connectome (brain graph).

AmphoraNet

The webserver implementation of the AMPHORA2 workflow for phylogenetic analysis of metagenomic shotgun sequencing data.

AmphoraVizu

Chart visualization for metagenomics analysis tools AMPHORA2 and AmphoraNet.

SCARF

Free online association rule mining tool.

SECLAF

Sequence classification using deep learning

MetaHMM

Find genes in metagenomes, using Hidden Markov Models.

PDB_Amyloid

Live list of the amyloid- and amyloid precursor molecules from the PDB

Protein sequence analysis

Find occurrences of a short amino acid sequence in UniProt, allowing wildcards and alternative amino acids.

Giant Virus Finder

The Giant Virus Finder is a software package for finding giant viruses in metagenomes.

Decomp

PDB Decomposition Tool.

ProtDict

Find proteins by lots of different identifiers, using our protein cross reference database.

Brownian Motion Simulator

Estimating the minimum passage time and docking ratio of nanoparticles to a specified target.

Nascent

Protein-Protein Physical Interaction Network Mapper.

SwissAlign

Fast and Exact Sequence Alignment with the Smith-Waterman Algorithm.
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