PIT Bioinformatics Group
Department of Computer Science, Eötvös University
Skip to content
  • Online tools
    • AmphoraNetThe webserver implementation of the AMPHORA2 workflow for phylogenetic analysis of metagenomic shotgun sequencing data
    • AmphoraVizuChart visualization for metagenomics analysis tools AMPHORA2 and AmphoraNet
    • Giant Virus FinderSoftware for finding giant viruses in metagenomes
    • Brownian SimulatorEstimate the minimum passage time and docking ratio of nanoparticles to a specified target
    • Budapest ConnectomeView a parameterizable connectome (brain graph)
    • DecompPDB entry correction and decomposition
    • MetaHMMFind genes in metagenomes, using Hidden Markov Models
    • PDB_AmyloidLive list of amyloid and amyloid-precursor proteins from the PDB
    • NascentPredict a protein-protein physical interaction network
    • ProtDictFind proteins by lots of different identifiers
    • Protein Sequence AnalysisFind matches of a short amino acid sequence in UniProt, allowing wildcards and alternatives
    • QuickKEGGFind UniProt codes for a KEGG reaction in an organism
    • SCARFFree online association rule mining tool
    • SECLAFSequence classification with neural networks
    • SwissAlignAlign a SwissProt sequence to all sequences of a taxonomy group
  • Publications
  • People
  • Gallery
  • Press & Media
  • Contact

Presentation on “Bioinformatics 2022” Conference by Vince Grolmusz on SVM-based AI methods in biology & chemistry

By root | December 13, 2022
0 Comment

The talk is on YouTube: https://www.youtube.com/watch?v=JqmFeM7E9uM

Category: Uncategorized
Post navigation
← Long interview with Vince Grolmusz on brain & mathematics Presentation on the human braingraph on the “Bioinformatics 2016” conference by Vince Grolmusz →

Budapest Reference Connectome

View a parameterizable connectome (brain graph).

AmphoraNet
The webserver implementation of the AMPHORA2 workflow for phylogenetic analysis of metagenomic shotgun sequencing data.

AmphoraVizu
Chart visualization for metagenomics analysis tools AMPHORA2 and AmphoraNet.

SCARF

Free online association rule mining tool.

SECLAF

Sequence classification using deep learning

MetaHMM
Find genes in metagenomes, using Hidden Markov Models.

PDB_Amyloid

Live list of the amyloid- and amyloid precursor molecules from the PDB

Protein sequence analysis

Find occurrences of a short amino acid sequence in UniProt, allowing wildcards and alternative amino acids.

Giant Virus Finder
The Giant Virus Finder is a software package for finding giant viruses in metagenomes.

Decomp
PDB Decomposition Tool.

ProtDict

Find proteins by lots of different identifiers, using our protein cross reference database.

Brownian Motion Simulator
Estimating the minimum passage time and docking ratio of nanoparticles to a specified target.

Nascent
Protein-Protein Physical Interaction Network Mapper.

SwissAlign
Fast and Exact Sequence Alignment with the Smith-Waterman Algorithm.
Copyright PIT Bioinformatics Group, 2005-2024
Login
Iconic One Theme | Powered by Wordpress